Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912912.1_cds_XP_016462988.1_56154
CDS Infomation

[gene=LOC107786069] [db_xref=GeneID:107786069] [protein=4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like] [protein_id=XP_016462988.1] [location=join(140491..140558,140915..140998,142043..142970)] [gbkey=CDS]
Sequence

ATGTCATCATCAATTATAGGTCGCTGTCATTTCGTAGCAGATAGCATTGAAGCTACCGGA
ACAAAGAGGAGGACTACAAGATGGAGGTCCCCGAGAGCAGCAGTAATTCCAAGTTTTCAT
CTCCCAATGCGCAGTAATGAAGTTAAAAATAGGACGTTCGCCGATGACATAAAAGCACTT
CGATTGATCACTGCAATCAAAACCCCATATCTACCGGATGGCAGATTCGATCTTGAGGCT
TATGACACGTTAGTAAATTTGCAAATCGAAAATGGCGCTGAGGGTGTGATAGTTGGTGGC
ACTACAGGTGAAGGTCAATTGATGAGCTGGGATGAACACATCATGCTCATTGGTCACACA
GTCAATTGTTTTGGGGGGTCAATCAAAGTCATCGGGAACACTGGAAGCAACTCCACAAGG
GAAGCAATACATGCAACTGAACAGGGATTTGCTGTAGGTATGCATGCAGCTCTTCATATT
AATCCCTACTACGGCAAGACCTCCTTAGAGGGTTTGATTTCTCACTTTGAAAGCGTGCTC
CCTATGGGCCCTACTATCATTTATAATGTGCCATCACGAACTGGTCAAGACATCCCCCCA
CGTGTAATTCAGACAATGGCAAAGAGTCCTAACCTTGCTGGTGTCAAAGAATGTGTTGGA
AATGATAGGGTGGAGCAGTATACAAGTAATGGGATTGTCGTTTGGAGTGGCAATGATGAC
GAATGCCATGTTTCAAGGTGGGATTATGGTGCTACAGGAGTTATTTCTGTTACCAGCAAC
TTGGTTCCTGGTCTGATGCGAGAACTGATGTTTGGAGGGAAGAACCTTGCTTTGAACTCA
AAGTTGATGCCTTTGGTGGAATGGCTGTTTCATGAGCCAAACCCCATTGCTCTAAATACA
GCTTTAGCTCAACTTGGGGTTGTGAGGCCAGTCTTTCGCCTTCCATATGTTCCACTTACG
AAGGCAAAGAGAGAGGAGTTCGTGAAAATTGTTAAGGATATTGGACGAGAGAACTTTATA
GGGGAGAGAGATGTCCAAGTTTTGGATGACAATGATTTCATTTTGGTGGGTCGGTATTAG

Peptide Sequence

PEP ID

XP_016462988.1
PEP Infomation

PREDICTED: 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MSSSIIGRCHFVADSIEATGTKRRTTRWRSPRAAVIPSFHLPMRSNEVKNRTFADDIKAL
RLITAIKTPYLPDGRFDLEAYDTLVNLQIENGAEGVIVGGTTGEGQLMSWDEHIMLIGHT
VNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFESVL
PMGPTIIYNVPSRTGQDIPPRVIQTMAKSPNLAGVKECVGNDRVEQYTSNGIVVWSGNDD
ECHVSRWDYGATGVISVTSNLVPGLMRELMFGGKNLALNSKLMPLVEWLFHEPNPIALNT
ALAQLGVVRPVFRLPYVPLTKAKREEFVKIVKDIGRENFIGERDVQVLDDNDFILVGRY

Transcript Sequence

Gene sequence data has not been registered.